Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC44A1Q8WWI5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 KRT8P50-201ENST00000562022 1438 ntBASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 AL023284.2-201ENST00000405850 579 ntBASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 AC073648.6-201ENST00000641589 218 ntBASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC44A1Q8WWI5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 ABHD17AP1-201ENST00000358206 933 ntBASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 MIR6786-201ENST00000616843 113 ntBASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC44A1Q8WWI5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 TSPY20P-201ENST00000450910 630 ntBASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AF186192.3-201ENST00000583427 947 ntBASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AC034236.2-201ENST00000606662 1610 ntBASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC44A1Q8WWI5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 MESTP1-201ENST00000404287 994 ntBASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.47■□□□□ 0.55
SLC44A1Q8WWI5 AC073195.1-201ENST00000607241 877 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms