Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAF3IP1Q8TDR0 KRT17P2-201ENST00000300992 1314 ntBASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MYLKP1-201ENST00000509077 1580 ntBASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MIR564-202ENST00000385049 94 ntBASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 AP000525.1-201ENST00000608286 694 ntBASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TRAF3IP1Q8TDR0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 MIR3180-5-201ENST00000583743 153 ntBASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 AC034236.2-201ENST00000606662 1610 ntBASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAF3IP1Q8TDR0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAF3IP1Q8TDR0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms