Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB3IL1Q8TBN0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 AC008556.1-201ENST00000610908 2040 ntBASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 FLJ13224-201ENST00000313737 1514 ntBASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 KRT8P3-201ENST00000519669 1449 ntBASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IL1Q8TBN0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RAB3IL1Q8TBN0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IL1Q8TBN0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IL1Q8TBN0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 POU5F1P3-201ENST00000428824 1078 ntBASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IL1Q8TBN0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 AL357033.4-201ENST00000617703 1807 ntBASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 AC008687.6-201ENST00000596318 630 ntBASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms