Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDH19Q8TAB3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 NOC2LP1-202ENST00000452600 2235 ntBASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 HMGA1P5-201ENST00000412453 271 ntBASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 KRT18P57-201ENST00000443599 1254 ntBASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 AC112497.1-201ENST00000624824 639 ntBASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDH19Q8TAB3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 AC104390.1-201ENST00000555663 520 ntBASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH19Q8TAB3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 AC018470.1-201ENST00000624790 3129 ntBASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 TERF1P1-201ENST00000311003 1181 ntBASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 AC009947.2-201ENST00000444014 672 ntBASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH19Q8TAB3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDH19Q8TAB3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms