Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 FAM197Y8-203ENST00000450145 560 ntBASIC18.91■□□□□ 0.62
PJA1Q8NG27 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PJA1Q8NG27 AL158211.5-201ENST00000623583 2518 ntBASIC18.91■□□□□ 0.62
PJA1Q8NG27 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
PJA1Q8NG27 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 TNXA-203ENST00000507684 2038 ntBASIC18.9■□□□□ 0.62
PJA1Q8NG27 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 AL031284.1-201ENST00000419297 478 ntBASIC18.9■□□□□ 0.62
PJA1Q8NG27 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 RN7SL606P-201ENST00000472779 293 ntBASIC18.9■□□□□ 0.62
PJA1Q8NG27 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 AP005901.3-202ENST00000581653 237 ntBASIC18.9■□□□□ 0.62
PJA1Q8NG27 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PJA1Q8NG27 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PJA1Q8NG27 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PJA1Q8NG27 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PJA1Q8NG27 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PJA1Q8NG27 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.89■□□□□ 0.62
PJA1Q8NG27 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 AP000974.1-201ENST00000623909 2387 ntBASIC18.89■□□□□ 0.61
PJA1Q8NG27 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 KRT18P67-201ENST00000432816 1264 ntBASIC18.89■□□□□ 0.61
PJA1Q8NG27 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 RCC2P3-201ENST00000418112 1537 ntBASIC18.89■□□□□ 0.61
PJA1Q8NG27 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PJA1Q8NG27 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PJA1Q8NG27 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 AC008556.1-201ENST00000610908 2040 ntBASIC18.88■□□□□ 0.61
PJA1Q8NG27 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 FAM220CP-201ENST00000395253 831 ntBASIC18.88■□□□□ 0.61
PJA1Q8NG27 AF186996.4-201ENST00000467186 377 ntBASIC18.88■□□□□ 0.61
PJA1Q8NG27 RNPS1P1-201ENST00000507437 918 ntBASIC18.88■□□□□ 0.61
PJA1Q8NG27 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PJA1Q8NG27 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PJA1Q8NG27 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PJA1Q8NG27 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PJA1Q8NG27 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
PJA1Q8NG27 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PJA1Q8NG27 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PJA1Q8NG27 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms