Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 KRT8P45-201ENST00000414328 1447 ntBASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 GPAT2P1-201ENST00000444924 1672 ntBASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 AC126763.1-201ENST00000552015 2118 ntBASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 AP006294.2-201ENST00000641667 209 ntBASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF439Q8NDP4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 AC008556.1-201ENST00000610908 2040 ntBASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 UNC93B2-201ENST00000285383 730 ntBASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF439Q8NDP4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF439Q8NDP4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms