Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 AL353807.1-201ENST00000427475 662 ntBASIC18.05■□□□□ 0.48
CPSF7Q8N684 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 CD177P1-201ENST00000606252 935 ntBASIC18.05■□□□□ 0.48
CPSF7Q8N684 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 AC026471.5-201ENST00000615068 467 ntBASIC18.05■□□□□ 0.48
CPSF7Q8N684 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 BCL2-203ENST00000589955 5011 ntBASIC18.05■□□□□ 0.48
CPSF7Q8N684 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 FAM197Y1-201ENST00000421178 764 ntBASIC18.04■□□□□ 0.48
CPSF7Q8N684 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.04■□□□□ 0.48
CPSF7Q8N684 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPSF7Q8N684 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AP003071.4-201ENST00000562276 1284 ntBASIC18.03■□□□□ 0.48
CPSF7Q8N684 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 SIRPAP1-201ENST00000448467 1770 ntBASIC18.03■□□□□ 0.48
CPSF7Q8N684 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
CPSF7Q8N684 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 AC008556.1-201ENST00000610908 2040 ntBASIC18.03■□□□□ 0.48
CPSF7Q8N684 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPSF7Q8N684 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms