Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC005082.1-201ENST00000413042 2259 ntBASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC33Q8N5R6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 VENTXP5-201ENST00000523979 775 ntBASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 AL138781.2-201ENST00000617896 1843 ntBASIC19.35■□□□□ 0.69
CCDC33Q8N5R6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 HEIH-201ENST00000623091 1652 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 AP000523.1-201ENST00000398242 1049 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 KRT18P48-201ENST00000434763 852 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 KRT126P-201ENST00000549467 1181 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 MIR4674-201ENST00000582457 87 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 AC116407.4-201ENST00000623319 1061 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 RCC2P3-201ENST00000418112 1537 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 AC007613.1-201ENST00000572811 2597 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 KRT8P3-201ENST00000519669 1449 ntBASIC19.34■□□□□ 0.69
CCDC33Q8N5R6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 AC026471.1-201ENST00000564629 3026 ntBASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 AC126763.1-201ENST00000552015 2118 ntBASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC33Q8N5R6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC33Q8N5R6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms