Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 KRT18P29-201ENST00000397031 1267 ntBASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 AC011506.1-201ENST00000474329 610 ntBASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
CCDC50Q8IVM0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 AC068880.1-201ENST00000507289 2297 ntBASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 FAM197Y1-201ENST00000421178 764 ntBASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 AC130371.2-201ENST00000619443 611 ntBASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CCDC50Q8IVM0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 TSPY20P-201ENST00000450910 630 ntBASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 AC112777.1-201ENST00000540175 1423 ntBASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC50Q8IVM0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms