Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 AC099398.1-201ENST00000567919 2776 ntBASIC16.43■□□□□ 0.22
LRRC28Q86X40 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 KRT18P16-201ENST00000510337 1294 ntBASIC16.43■□□□□ 0.22
LRRC28Q86X40 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.43■□□□□ 0.22
LRRC28Q86X40 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC28Q86X40 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRRC28Q86X40 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 TUBB8P6-201ENST00000436895 1288 ntBASIC16.42■□□□□ 0.22
LRRC28Q86X40 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 AL353708.3-201ENST00000610272 989 ntBASIC16.42■□□□□ 0.22
LRRC28Q86X40 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC28Q86X40 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRC28Q86X40 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC28Q86X40 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC28Q86X40 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.41■□□□□ 0.22
LRRC28Q86X40 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms