Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 ID1-201ENST00000376105 1233 ntBASIC16.69■□□□□ 0.26
SHFQ7M4L6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 AL445675.2-201ENST00000620291 557 ntBASIC16.69■□□□□ 0.26
SHFQ7M4L6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 GNAS-203ENST00000306120 1878 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 POU5F1P3-201ENST00000428824 1078 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 AC133681.1-201ENST00000465482 601 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 Z85996.1-201ENST00000494644 937 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 PRSS44-201ENST00000515154 1146 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 AC110285.5-201ENST00000611501 352 ntBASIC16.68■□□□□ 0.26
SHFQ7M4L6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHFQ7M4L6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SHFQ7M4L6 KRT8P32-201ENST00000512863 1461 ntBASIC16.67■□□□□ 0.26
SHFQ7M4L6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 AC233263.1-201ENST00000578059 224 ntBASIC16.67■□□□□ 0.26
SHFQ7M4L6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 KRT8P11-201ENST00000409686 1436 ntBASIC16.67■□□□□ 0.26
SHFQ7M4L6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SHFQ7M4L6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHFQ7M4L6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms