Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR2Q6PJQ5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXR2Q6PJQ5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
FOXR2Q6PJQ5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR2Q6PJQ5 AC066615.1-201ENST00000640911 628 ntBASIC20.08■□□□□ 0.81
FOXR2Q6PJQ5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 KRT8P9-201ENST00000558927 1449 ntBASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR2Q6PJQ5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 TSPY15P-201ENST00000457163 923 ntBASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 KRT18P55-202ENST00000578578 1546 ntBASIC20.07■□□□□ 0.8
FOXR2Q6PJQ5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 AL133373.2-201ENST00000623187 2828 ntBASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 GNAS-203ENST00000306120 1878 ntBASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXR2Q6PJQ5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 AC008687.5-201ENST00000593746 558 ntBASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 LETM1P2-201ENST00000597330 2178 ntBASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR2Q6PJQ5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR2Q6PJQ5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms