Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKAL1Q5VV42 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 HOXB1-202ENST00000577092 1414 ntBASIC20.19■□□□□ 0.82
CDKAL1Q5VV42 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 AC009102.3-201ENST00000623118 1491 ntBASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 MIR149-201ENST00000384879 89 ntBASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 REXO1L10P-201ENST00000615707 1290 ntBASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 REXO1L12P-201ENST00000622156 912 ntBASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDKAL1Q5VV42 AC006116.8-202ENST00000587620 1550 ntBASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 PRORSD1P-201ENST00000295112 541 ntBASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 AC113410.3-201ENST00000623366 203 ntBASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDKAL1Q5VV42 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 AC093010.1-201ENST00000473625 1624 ntBASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 ABHD17AP1-201ENST00000358206 933 ntBASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 RPS2P55-201ENST00000397318 883 ntBASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 AC107956.1-201ENST00000494359 873 ntBASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDKAL1Q5VV42 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms