Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AC068587.9-201ENST00000641814 219 ntBASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 PCDHB19P-201ENST00000570871 2371 ntBASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC6LQ2NKX8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 AC112777.1-201ENST00000540175 1423 ntBASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 AP006587.1-201ENST00000534129 1502 ntBASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC6LQ2NKX8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 TSPY23P-201ENST00000440136 739 ntBASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 AL121761.2-201ENST00000598007 1648 ntBASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC6LQ2NKX8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 KRT17P1-201ENST00000399211 1546 ntBASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 AL096828.2-201ENST00000567259 1965 ntBASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 GPX1P1-201ENST00000388829 606 ntBASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 NTF6G-201ENST00000591094 616 ntBASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
ERCC6LQ2NKX8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
ERCC6LQ2NKX8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.51■□□□□ 0.71
ERCC6LQ2NKX8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms