Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 ZNF815P-204ENST00000434898 1737 ntBASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 AP003733.1-201ENST00000491725 852 ntBASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 SLC25A1P1-201ENST00000528351 927 ntBASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 TP73-AS1-207ENST00000624167 988 ntBASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTC1Q2NKJ3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 KRT8P7-201ENST00000533003 1432 ntBASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 AC092183.1-201ENST00000469884 875 ntBASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CTC1Q2NKJ3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC005082.1-201ENST00000413042 2259 ntBASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 RN7SL606P-201ENST00000472779 293 ntBASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC104390.1-201ENST00000555663 520 ntBASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AL773604.1-201ENST00000617417 272 ntBASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTC1Q2NKJ3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms