Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.49■□□□□ 0.23
H3F3AP84243 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.49■□□□□ 0.23
H3F3AP84243 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 AC009065.1-201ENST00000564055 1225 ntBASIC16.49■□□□□ 0.23
H3F3AP84243 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.49■□□□□ 0.23
H3F3AP84243 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.49■□□□□ 0.23
H3F3AP84243 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.49■□□□□ 0.23
H3F3AP84243 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
H3F3AP84243 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
H3F3AP84243 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H3F3AP84243 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.49■□□□□ 0.23
H3F3AP84243 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H3F3AP84243 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
H3F3AP84243 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 SDHAP2-201ENST00000455183 2001 ntBASIC16.48■□□□□ 0.23
H3F3AP84243 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
H3F3AP84243 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.48■□□□□ 0.23
H3F3AP84243 AC090164.3-201ENST00000610780 2143 ntBASIC16.48■□□□□ 0.23
H3F3AP84243 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 AK4P3-201ENST00000418260 669 ntBASIC16.48■□□□□ 0.23
H3F3AP84243 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.48■□□□□ 0.23
H3F3AP84243 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
H3F3AP84243 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.48■□□□□ 0.23
H3F3AP84243 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.48■□□□□ 0.23
H3F3AP84243 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H3F3AP84243 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3AP84243 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
H3F3AP84243 AC009102.3-201ENST00000623118 1491 ntBASIC16.48■□□□□ 0.23
H3F3AP84243 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
H3F3AP84243 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3AP84243 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.47■□□□□ 0.23
H3F3AP84243 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.47■□□□□ 0.23
H3F3AP84243 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.47■□□□□ 0.23
H3F3AP84243 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H3F3AP84243 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
H3F3AP84243 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 STARP1-201ENST00000397973 869 ntBASIC16.47■□□□□ 0.23
H3F3AP84243 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
H3F3AP84243 AC034232.1-201ENST00000506026 1064 ntBASIC16.47■□□□□ 0.23
H3F3AP84243 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
H3F3AP84243 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.47■□□□□ 0.23
H3F3AP84243 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
H3F3AP84243 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.47■□□□□ 0.23
H3F3AP84243 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 AC026471.1-201ENST00000564629 3026 ntBASIC16.47■□□□□ 0.23
H3F3AP84243 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 AC009113.1-201ENST00000570267 2443 ntBASIC16.47■□□□□ 0.23
H3F3AP84243 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3AP84243 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3AP84243 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3AP84243 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3AP84243 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3AP84243 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3AP84243 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3AP84243 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3AP84243 AIRN-201ENST00000601203 4374 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms