Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL20P78556 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL20P78556 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL20P78556 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 PKD1P1-201ENST00000458669 6805 ntBASIC14.54□□□□□ -0.08
CCL20P78556 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL20P78556 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL20P78556 AC008741.2-201ENST00000612792 3115 ntBASIC14.53□□□□□ -0.08
CCL20P78556 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 AL096828.2-201ENST00000567259 1965 ntBASIC14.53□□□□□ -0.08
CCL20P78556 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 TSPY21P-201ENST00000433481 731 ntBASIC14.53□□□□□ -0.08
CCL20P78556 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL20P78556 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 AC013268.1-206ENST00000638368 961 ntBASIC14.53□□□□□ -0.08
CCL20P78556 AC112229.1-201ENST00000639295 961 ntBASIC14.53□□□□□ -0.08
CCL20P78556 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL20P78556 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL20P78556 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCL20P78556 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL20P78556 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCL20P78556 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL20P78556 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 AC105020.1-201ENST00000435356 2205 ntBASIC14.52□□□□□ -0.08
CCL20P78556 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL20P78556 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL20P78556 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCL20P78556 KRT19P1-201ENST00000405746 1186 ntBASIC14.52□□□□□ -0.09
CCL20P78556 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL20P78556 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.52□□□□□ -0.09
CCL20P78556 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL20P78556 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL20P78556 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL20P78556 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 AL596257.1-201ENST00000641463 2694 ntBASIC14.52□□□□□ -0.09
CCL20P78556 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CCL20P78556 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCL20P78556 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
CCL20P78556 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL20P78556 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL20P78556 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms