Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18■□□□□ 0.47
YBX1P67809 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
YBX1P67809 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.99■□□□□ 0.47
YBX1P67809 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
YBX1P67809 AC141257.4-201ENST00000634557 245 ntBASIC17.99■□□□□ 0.47
YBX1P67809 AC136944.6-201ENST00000634818 245 ntBASIC17.99■□□□□ 0.47
YBX1P67809 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
YBX1P67809 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
YBX1P67809 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.99■□□□□ 0.47
YBX1P67809 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
YBX1P67809 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YBX1P67809 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
YBX1P67809 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 MIR564-202ENST00000385049 94 ntBASIC17.98■□□□□ 0.47
YBX1P67809 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
YBX1P67809 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 WWOX-216ENST00000569818 525 ntBASIC17.98■□□□□ 0.47
YBX1P67809 AC006011.2-201ENST00000621313 1158 ntBASIC17.98■□□□□ 0.47
YBX1P67809 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.98■□□□□ 0.47
YBX1P67809 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 ABALON-201ENST00000629058 1903 ntBASIC17.98■□□□□ 0.47
YBX1P67809 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.98■□□□□ 0.47
YBX1P67809 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YBX1P67809 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.97■□□□□ 0.47
YBX1P67809 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
YBX1P67809 LIN28AP1-201ENST00000429574 405 ntBASIC17.97■□□□□ 0.47
YBX1P67809 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.97■□□□□ 0.47
YBX1P67809 AC104076.2-201ENST00000448912 469 ntBASIC17.97■□□□□ 0.47
YBX1P67809 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.97■□□□□ 0.47
YBX1P67809 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
YBX1P67809 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
YBX1P67809 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.96■□□□□ 0.47
YBX1P67809 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms