Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC022616.7-201ENST00000525383 220 ntBASIC16.24■□□□□ 0.19
UBE2NP61088 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.24■□□□□ 0.19
UBE2NP61088 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.24■□□□□ 0.19
UBE2NP61088 AC009065.1-201ENST00000564055 1225 ntBASIC16.24■□□□□ 0.19
UBE2NP61088 AC010331.1-201ENST00000611423 582 ntBASIC16.24■□□□□ 0.19
UBE2NP61088 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.24■□□□□ 0.19
UBE2NP61088 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBE2NP61088 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.24■□□□□ 0.19
UBE2NP61088 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBE2NP61088 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.24■□□□□ 0.19
UBE2NP61088 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBE2NP61088 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBE2NP61088 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.24■□□□□ 0.19
UBE2NP61088 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.24■□□□□ 0.19
UBE2NP61088 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBE2NP61088 AP000974.1-201ENST00000623909 2387 ntBASIC16.23■□□□□ 0.19
UBE2NP61088 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 AC018445.3-201ENST00000624177 1945 ntBASIC16.23■□□□□ 0.19
UBE2NP61088 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.23■□□□□ 0.19
UBE2NP61088 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.23■□□□□ 0.19
UBE2NP61088 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.23■□□□□ 0.19
UBE2NP61088 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.23■□□□□ 0.19
UBE2NP61088 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBE2NP61088 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2NP61088 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2NP61088 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
UBE2NP61088 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2NP61088 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.22■□□□□ 0.19
UBE2NP61088 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 AC087289.5-201ENST00000586076 3175 ntBASIC16.22■□□□□ 0.19
UBE2NP61088 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 BX323043.1-201ENST00000641006 1765 ntBASIC16.22■□□□□ 0.19
UBE2NP61088 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBE2NP61088 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2NP61088 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.22■□□□□ 0.19
UBE2NP61088 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
UBE2NP61088 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
UBE2NP61088 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.21■□□□□ 0.19
UBE2NP61088 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
UBE2NP61088 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2NP61088 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms