Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM11AP58511 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM11AP58511 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM11AP58511 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM11AP58511 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.04■□□□□ 0.32
SMIM11AP58511 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM11AP58511 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.03■□□□□ 0.32
SMIM11AP58511 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMIM11AP58511 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SMIM11AP58511 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.03■□□□□ 0.32
SMIM11AP58511 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMIM11AP58511 MIR935-201ENST00000401179 91 ntBASIC17.03■□□□□ 0.32
SMIM11AP58511 RNA5SP413-201ENST00000516373 109 ntBASIC17.03■□□□□ 0.32
SMIM11AP58511 AC026271.3-201ENST00000571884 352 ntBASIC17.03■□□□□ 0.32
SMIM11AP58511 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMIM11AP58511 AC124016.1-201ENST00000609552 612 ntBASIC17.03■□□□□ 0.32
SMIM11AP58511 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMIM11AP58511 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMIM11AP58511 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM11AP58511 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SMIM11AP58511 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM11AP58511 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM11AP58511 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.02■□□□□ 0.32
SMIM11AP58511 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.02■□□□□ 0.32
SMIM11AP58511 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.02■□□□□ 0.32
SMIM11AP58511 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM11AP58511 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
SMIM11AP58511 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM11AP58511 AC233263.1-201ENST00000578059 224 ntBASIC17.02■□□□□ 0.32
SMIM11AP58511 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
SMIM11AP58511 AL031985.4-201ENST00000642138 673 ntBASIC17.02■□□□□ 0.32
SMIM11AP58511 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SMIM11AP58511 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.02■□□□□ 0.31
SMIM11AP58511 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM11AP58511 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM11AP58511 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM11AP58511 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM11AP58511 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.02■□□□□ 0.31
SMIM11AP58511 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SMIM11AP58511 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM11AP58511 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMIM11AP58511 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM11AP58511 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SMIM11AP58511 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.01■□□□□ 0.31
SMIM11AP58511 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SMIM11AP58511 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SMIM11AP58511 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM11AP58511 AC011298.2-201ENST00000617989 482 ntBASIC17.01■□□□□ 0.31
SMIM11AP58511 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 KRT16P1-201ENST00000399124 1418 ntBASIC17.01■□□□□ 0.31
SMIM11AP58511 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM11AP58511 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.01■□□□□ 0.31
SMIM11AP58511 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM11AP58511 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM11AP58511 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms