Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
VSX2P58304 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 LETM1P2-201ENST00000597330 2178 ntBASIC17.65■□□□□ 0.42
VSX2P58304 ANO7L1-203ENST00000602586 1720 ntBASIC17.65■□□□□ 0.42
VSX2P58304 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
VSX2P58304 AP000593.1-201ENST00000393668 712 ntBASIC17.65■□□□□ 0.42
VSX2P58304 KRT18P41-201ENST00000518924 1277 ntBASIC17.65■□□□□ 0.42
VSX2P58304 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VSX2P58304 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 HYMAI.1-201ENST00000620949 238 ntBASIC17.65■□□□□ 0.42
VSX2P58304 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
VSX2P58304 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.65■□□□□ 0.42
VSX2P58304 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VSX2P58304 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VSX2P58304 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VSX2P58304 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VSX2P58304 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VSX2P58304 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VSX2P58304 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.64■□□□□ 0.41
VSX2P58304 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VSX2P58304 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.64■□□□□ 0.41
VSX2P58304 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VSX2P58304 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VSX2P58304 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VSX2P58304 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 AC099343.3-201ENST00000605834 2503 ntBASIC17.63■□□□□ 0.41
VSX2P58304 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.63■□□□□ 0.41
VSX2P58304 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 AC083849.1-201ENST00000615227 514 ntBASIC17.63■□□□□ 0.41
VSX2P58304 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.63■□□□□ 0.41
VSX2P58304 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 AC112777.1-201ENST00000540175 1423 ntBASIC17.63■□□□□ 0.41
VSX2P58304 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
VSX2P58304 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VSX2P58304 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.62■□□□□ 0.41
VSX2P58304 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 AC093525.10-201ENST00000625130 1569 ntBASIC17.62■□□□□ 0.41
VSX2P58304 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.62■□□□□ 0.41
VSX2P58304 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VSX2P58304 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.62■□□□□ 0.41
VSX2P58304 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms