Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 AC141257.4-201ENST00000634557 245 ntBASIC18.65■□□□□ 0.58
WNT3AP56704 AC136944.6-201ENST00000634818 245 ntBASIC18.65■□□□□ 0.58
WNT3AP56704 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.65■□□□□ 0.58
WNT3AP56704 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
WNT3AP56704 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
WNT3AP56704 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
WNT3AP56704 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
WNT3AP56704 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
WNT3AP56704 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 SEC1P-202ENST00000473944 940 ntBASIC18.64■□□□□ 0.57
WNT3AP56704 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.64■□□□□ 0.57
WNT3AP56704 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
WNT3AP56704 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.64■□□□□ 0.57
WNT3AP56704 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
WNT3AP56704 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.64■□□□□ 0.57
WNT3AP56704 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
WNT3AP56704 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.64■□□□□ 0.57
WNT3AP56704 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 SDHAP2-201ENST00000455183 2001 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 MIR149-201ENST00000384879 89 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.63■□□□□ 0.57
WNT3AP56704 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
WNT3AP56704 AC010240.3-201ENST00000607688 395 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 AC005363.2-201ENST00000618631 242 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.63■□□□□ 0.57
WNT3AP56704 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 AC009102.3-201ENST00000623118 1491 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
WNT3AP56704 AL162741.1-201ENST00000565563 1558 ntBASIC18.63■□□□□ 0.57
WNT3AP56704 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.63■□□□□ 0.57
WNT3AP56704 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
WNT3AP56704 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
WNT3AP56704 ESPNP-201ENST00000270691 2015 ntBASIC18.62■□□□□ 0.57
WNT3AP56704 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
WNT3AP56704 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 LIN28AP1-201ENST00000429574 405 ntBASIC18.62■□□□□ 0.57
WNT3AP56704 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.62■□□□□ 0.57
WNT3AP56704 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.62■□□□□ 0.57
WNT3AP56704 MIR3180-4-201ENST00000582223 153 ntBASIC18.62■□□□□ 0.57
WNT3AP56704 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
WNT3AP56704 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.62■□□□□ 0.57
WNT3AP56704 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
WNT3AP56704 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
WNT3AP56704 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms