Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC009102.3-201ENST00000623118 1491 ntBASIC19.67■□□□□ 0.74
CDH8P55286 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDH8P55286 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH8P55286 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 HBZP1-201ENST00000354915 429 ntBASIC19.66■□□□□ 0.74
CDH8P55286 MIR149-201ENST00000384879 89 ntBASIC19.66■□□□□ 0.74
CDH8P55286 SPDYE13P-201ENST00000445314 798 ntBASIC19.66■□□□□ 0.74
CDH8P55286 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH8P55286 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH8P55286 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 AC083849.1-201ENST00000615227 514 ntBASIC19.66■□□□□ 0.74
CDH8P55286 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH8P55286 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH8P55286 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH8P55286 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH8P55286 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 AC073592.3-201ENST00000625118 1834 ntBASIC19.65■□□□□ 0.74
CDH8P55286 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH8P55286 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH8P55286 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH8P55286 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 AL136038.4-201ENST00000603606 1261 ntBASIC19.65■□□□□ 0.74
CDH8P55286 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
CDH8P55286 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH8P55286 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CDH8P55286 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH8P55286 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDH8P55286 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH8P55286 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.64■□□□□ 0.74
CDH8P55286 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH8P55286 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 PVRIG2P-201ENST00000435460 978 ntBASIC19.64■□□□□ 0.73
CDH8P55286 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.64■□□□□ 0.73
CDH8P55286 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.64■□□□□ 0.73
CDH8P55286 VENTXP5-201ENST00000523979 775 ntBASIC19.64■□□□□ 0.73
CDH8P55286 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.64■□□□□ 0.73
CDH8P55286 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CDH8P55286 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH8P55286 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDH8P55286 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH8P55286 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDH8P55286 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH8P55286 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDH8P55286 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CDH8P55286 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH8P55286 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms