Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1LP55160 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKAP1LP55160 AC009113.1-201ENST00000570267 2443 ntBASIC20.17■□□□□ 0.82
NCKAP1LP55160 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
NCKAP1LP55160 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1LP55160 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 VENTXP5-201ENST00000523979 775 ntBASIC20.17■□□□□ 0.82
NCKAP1LP55160 AL445228.2-201ENST00000605589 952 ntBASIC20.17■□□□□ 0.82
NCKAP1LP55160 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1LP55160 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
NCKAP1LP55160 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1LP55160 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.17■□□□□ 0.82
NCKAP1LP55160 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 ZNF444P1-201ENST00000559497 298 ntBASIC20.16■□□□□ 0.82
NCKAP1LP55160 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 LINC01126-201ENST00000623515 1646 ntBASIC20.16■□□□□ 0.82
NCKAP1LP55160 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1LP55160 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.16■□□□□ 0.82
NCKAP1LP55160 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 GMCL1P1-201ENST00000463439 1581 ntBASIC20.15■□□□□ 0.82
NCKAP1LP55160 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1LP55160 AC104581.1-202ENST00000635932 2618 ntBASIC20.15■□□□□ 0.82
NCKAP1LP55160 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NCKAP1LP55160 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKAP1LP55160 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKAP1LP55160 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.14■□□□□ 0.82
NCKAP1LP55160 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NCKAP1LP55160 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 MIR662-201ENST00000384847 95 ntBASIC20.14■□□□□ 0.81
NCKAP1LP55160 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.14■□□□□ 0.81
NCKAP1LP55160 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.14■□□□□ 0.81
NCKAP1LP55160 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.14■□□□□ 0.81
NCKAP1LP55160 AL121956.5-201ENST00000625261 221 ntBASIC20.14■□□□□ 0.81
NCKAP1LP55160 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.14■□□□□ 0.81
NCKAP1LP55160 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKAP1LP55160 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms