Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL031284.1-201ENST00000419297 478 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC1P51610 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.05■□□□□ 0.16
HCFC1P51610 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.05■□□□□ 0.16
HCFC1P51610 AC009065.1-201ENST00000564055 1225 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.05■□□□□ 0.16
HCFC1P51610 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 AL020996.1-203ENST00000536896 2307 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 TREX1-205ENST00000625293 1783 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HCFC1P51610 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HCFC1P51610 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HCFC1P51610 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HCFC1P51610 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.04■□□□□ 0.16
HCFC1P51610 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 AC113404.2-201ENST00000507884 177 ntBASIC16.04■□□□□ 0.16
HCFC1P51610 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.04■□□□□ 0.16
HCFC1P51610 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 AC117500.6-201ENST00000624871 588 ntBASIC16.04■□□□□ 0.16
HCFC1P51610 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC1P51610 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.04■□□□□ 0.16
HCFC1P51610 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.04■□□□□ 0.16
HCFC1P51610 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCFC1P51610 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.04■□□□□ 0.16
HCFC1P51610 RNF165-205ENST00000588679 2904 ntBASIC16.03■□□□□ 0.16
HCFC1P51610 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 AC005332.7-201ENST00000614046 2005 ntBASIC16.03■□□□□ 0.16
HCFC1P51610 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC1P51610 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1P51610 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1P51610 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC1P51610 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HCFC1P51610 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC1P51610 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC1P51610 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HCFC1P51610 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1P51610 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HCFC1P51610 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC1P51610 AC073648.2-201ENST00000510116 352 ntBASIC16.02■□□□□ 0.16
HCFC1P51610 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
HCFC1P51610 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1P51610 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC1P51610 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HCFC1P51610 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC1P51610 IRX1P1-201ENST00000438849 1838 ntBASIC16.02■□□□□ 0.16
HCFC1P51610 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC1P51610 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC1P51610 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.02■□□□□ 0.15
HCFC1P51610 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC1P51610 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms