Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HLCSP50747 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.64■□□□□ 0.41
HLCSP50747 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.64■□□□□ 0.41
HLCSP50747 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.64■□□□□ 0.41
HLCSP50747 AC010331.1-201ENST00000611423 582 ntBASIC17.64■□□□□ 0.41
HLCSP50747 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLCSP50747 ZNF815P-204ENST00000434898 1737 ntBASIC17.64■□□□□ 0.41
HLCSP50747 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLCSP50747 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
HLCSP50747 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
HLCSP50747 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.63■□□□□ 0.41
HLCSP50747 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 LIN28AP1-201ENST00000429574 405 ntBASIC17.63■□□□□ 0.41
HLCSP50747 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLCSP50747 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.63■□□□□ 0.41
HLCSP50747 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 AC104417.2-201ENST00000562989 1793 ntBASIC17.63■□□□□ 0.41
HLCSP50747 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 AC073508.3-201ENST00000619697 1419 ntBASIC17.63■□□□□ 0.41
HLCSP50747 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLCSP50747 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 INGX-201ENST00000359239 846 ntBASIC17.62■□□□□ 0.41
HLCSP50747 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
HLCSP50747 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 KRT18P57-201ENST00000443599 1254 ntBASIC17.62■□□□□ 0.41
HLCSP50747 TSPY17P-201ENST00000450329 467 ntBASIC17.62■□□□□ 0.41
HLCSP50747 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.62■□□□□ 0.41
HLCSP50747 CA15P1-201ENST00000481698 905 ntBASIC17.62■□□□□ 0.41
HLCSP50747 PRSS44-201ENST00000515154 1146 ntBASIC17.62■□□□□ 0.41
HLCSP50747 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 FAM87A-204ENST00000613235 858 ntBASIC17.62■□□□□ 0.41
HLCSP50747 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.62■□□□□ 0.41
HLCSP50747 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
HLCSP50747 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
HLCSP50747 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLCSP50747 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HLCSP50747 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HLCSP50747 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLCSP50747 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.61■□□□□ 0.41
HLCSP50747 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLCSP50747 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.61■□□□□ 0.41
HLCSP50747 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms