Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.41■□□□□ 0.86
CPT1AP50416 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.41■□□□□ 0.86
CPT1AP50416 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.41■□□□□ 0.86
CPT1AP50416 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.41■□□□□ 0.86
CPT1AP50416 AP001005.1-201ENST00000571755 1248 ntBASIC20.41■□□□□ 0.86
CPT1AP50416 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CPT1AP50416 AC023511.2-201ENST00000618803 211 ntBASIC20.41■□□□□ 0.86
CPT1AP50416 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.41■□□□□ 0.86
CPT1AP50416 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.41■□□□□ 0.86
CPT1AP50416 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.41■□□□□ 0.86
CPT1AP50416 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CPT1AP50416 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.41■□□□□ 0.86
CPT1AP50416 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CPT1AP50416 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
CPT1AP50416 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.4■□□□□ 0.86
CPT1AP50416 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPT1AP50416 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 AL590627.1-203ENST00000421194 1026 ntBASIC20.4■□□□□ 0.86
CPT1AP50416 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPT1AP50416 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.4■□□□□ 0.86
CPT1AP50416 FAM197Y8-203ENST00000450145 560 ntBASIC20.4■□□□□ 0.86
CPT1AP50416 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.4■□□□□ 0.86
CPT1AP50416 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.4■□□□□ 0.86
CPT1AP50416 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.4■□□□□ 0.86
CPT1AP50416 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.4■□□□□ 0.86
CPT1AP50416 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPT1AP50416 AL773604.1-201ENST00000617417 272 ntBASIC20.4■□□□□ 0.86
CPT1AP50416 TP73-AS1-207ENST00000624167 988 ntBASIC20.4■□□□□ 0.86
CPT1AP50416 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CPT1AP50416 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPT1AP50416 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPT1AP50416 AL161938.1-201ENST00000569833 2180 ntBASIC20.39■□□□□ 0.86
CPT1AP50416 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPT1AP50416 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPT1AP50416 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.39■□□□□ 0.85
CPT1AP50416 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.39■□□□□ 0.85
CPT1AP50416 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CPT1AP50416 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CPT1AP50416 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.39■□□□□ 0.85
CPT1AP50416 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.39■□□□□ 0.85
CPT1AP50416 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
CPT1AP50416 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.39■□□□□ 0.85
CPT1AP50416 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.39■□□□□ 0.85
CPT1AP50416 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.39■□□□□ 0.85
CPT1AP50416 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPT1AP50416 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.38■□□□□ 0.85
CPT1AP50416 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPT1AP50416 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPT1AP50416 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.38■□□□□ 0.85
CPT1AP50416 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CPT1AP50416 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.38■□□□□ 0.85
CPT1AP50416 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPT1AP50416 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
CPT1AP50416 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CPT1AP50416 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 KRT18P67-201ENST00000432816 1264 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms