Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC9A3P48764 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
SLC9A3P48764 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC9A3P48764 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC9A3P48764 FAM207BP-201ENST00000447172 505 ntBASIC16.93■□□□□ 0.3
SLC9A3P48764 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SLC9A3P48764 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC9A3P48764 AC130371.2-201ENST00000619443 611 ntBASIC16.93■□□□□ 0.3
SLC9A3P48764 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC9A3P48764 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC9A3P48764 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SLC9A3P48764 KRT8P45-201ENST00000414328 1447 ntBASIC16.93■□□□□ 0.3
SLC9A3P48764 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC9A3P48764 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC9A3P48764 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC9A3P48764 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC9A3P48764 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC9A3P48764 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC9A3P48764 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC9A3P48764 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC9A3P48764 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC9A3P48764 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC9A3P48764 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC9A3P48764 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC9A3P48764 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC9A3P48764 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC9A3P48764 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC9A3P48764 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC9A3P48764 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SLC9A3P48764 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC9A3P48764 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC9A3P48764 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC9A3P48764 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC9A3P48764 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC9A3P48764 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC9A3P48764 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC9A3P48764 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC9A3P48764 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC9A3P48764 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC9A3P48764 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC9A3P48764 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC9A3P48764 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC9A3P48764 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms