Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A6P48664 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A6P48664 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SLC1A6P48664 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A6P48664 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A6P48664 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A6P48664 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC1A6P48664 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 KRT16P5-201ENST00000455284 522 ntBASIC18.16■□□□□ 0.5
SLC1A6P48664 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A6P48664 KRT18P41-201ENST00000518924 1277 ntBASIC18.16■□□□□ 0.5
SLC1A6P48664 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A6P48664 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 AC012317.2-201ENST00000623305 2251 ntBASIC18.16■□□□□ 0.5
SLC1A6P48664 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A6P48664 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A6P48664 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A6P48664 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 SIRPAP1-201ENST00000448467 1770 ntBASIC18.15■□□□□ 0.5
SLC1A6P48664 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC1A6P48664 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC1A6P48664 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 AL096828.2-201ENST00000567259 1965 ntBASIC18.15■□□□□ 0.5
SLC1A6P48664 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A6P48664 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A6P48664 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A6P48664 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SLC1A6P48664 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC1A6P48664 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC1A6P48664 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A6P48664 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
SLC1A6P48664 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 AC004980.1-204ENST00000429707 299 ntBASIC18.14■□□□□ 0.49
SLC1A6P48664 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A6P48664 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.14■□□□□ 0.49
SLC1A6P48664 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A6P48664 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC1A6P48664 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A6P48664 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms