Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.98■□□□□ 0.31
SLC1A3P43003 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A3P43003 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC1A3P43003 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SLC1A3P43003 AC073592.3-201ENST00000625118 1834 ntBASIC16.98■□□□□ 0.31
SLC1A3P43003 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A3P43003 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A3P43003 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLC1A3P43003 AC020916.1-201ENST00000587762 1774 ntBASIC16.97■□□□□ 0.31
SLC1A3P43003 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 KRT8P45-201ENST00000414328 1447 ntBASIC16.97■□□□□ 0.31
SLC1A3P43003 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC1A3P43003 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A3P43003 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A3P43003 MIR564-202ENST00000385049 94 ntBASIC16.97■□□□□ 0.31
SLC1A3P43003 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A3P43003 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC1A3P43003 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 AC116562.4-202ENST00000641738 218 ntBASIC16.97■□□□□ 0.31
SLC1A3P43003 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SLC1A3P43003 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A3P43003 AC067852.2-201ENST00000590513 2313 ntBASIC16.97■□□□□ 0.31
SLC1A3P43003 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A3P43003 AL499627.1-201ENST00000569373 2188 ntBASIC16.96■□□□□ 0.31
SLC1A3P43003 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A3P43003 AC092338.2-201ENST00000568827 1415 ntBASIC16.96■□□□□ 0.31
SLC1A3P43003 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SLC1A3P43003 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A3P43003 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC1A3P43003 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A3P43003 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC1A3P43003 KRT18P41-201ENST00000518924 1277 ntBASIC16.96■□□□□ 0.31
SLC1A3P43003 AP003041.3-201ENST00000527151 707 ntBASIC16.96■□□□□ 0.31
SLC1A3P43003 BX088651.1-201ENST00000540551 451 ntBASIC16.96■□□□□ 0.31
SLC1A3P43003 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A3P43003 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC1A3P43003 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC1A3P43003 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC1A3P43003 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC1A3P43003 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 AC126763.1-201ENST00000552015 2118 ntBASIC16.96■□□□□ 0.3
SLC1A3P43003 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC1A3P43003 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC1A3P43003 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SLC1A3P43003 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC1A3P43003 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
SLC1A3P43003 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC1A3P43003 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms