Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.93■□□□□ 0.78
TNFSF9P41273 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.93■□□□□ 0.78
TNFSF9P41273 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF9P41273 AC091076.1-201ENST00000610741 619 ntBASIC19.93■□□□□ 0.78
TNFSF9P41273 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF9P41273 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.93■□□□□ 0.78
TNFSF9P41273 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TNFSF9P41273 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.93■□□□□ 0.78
TNFSF9P41273 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TNFSF9P41273 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF9P41273 AL138781.2-201ENST00000617896 1843 ntBASIC19.92■□□□□ 0.78
TNFSF9P41273 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF9P41273 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF9P41273 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF9P41273 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF9P41273 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF9P41273 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF9P41273 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF9P41273 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF9P41273 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF9P41273 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TNFSF9P41273 AL024508.2-201ENST00000607749 1894 ntBASIC19.91■□□□□ 0.78
TNFSF9P41273 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF9P41273 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF9P41273 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF9P41273 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TNFSF9P41273 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFSF9P41273 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.91■□□□□ 0.78
TNFSF9P41273 LINC01126-201ENST00000623515 1646 ntBASIC19.91■□□□□ 0.78
TNFSF9P41273 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF9P41273 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.9■□□□□ 0.78
TNFSF9P41273 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF9P41273 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 AC073592.3-201ENST00000625118 1834 ntBASIC19.9■□□□□ 0.78
TNFSF9P41273 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF9P41273 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF9P41273 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
TNFSF9P41273 AC104581.1-202ENST00000635932 2618 ntBASIC19.89■□□□□ 0.78
TNFSF9P41273 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TNFSF9P41273 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TNFSF9P41273 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 UPK3BP1-201ENST00000428678 509 ntBASIC19.89■□□□□ 0.77
TNFSF9P41273 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFSF9P41273 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms