Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC055717.3-201ENST00000622967 595 ntBASIC22.68■■□□□ 1.22
PDE6BP35913 RNF165-205ENST00000588679 2904 ntBASIC22.68■■□□□ 1.22
PDE6BP35913 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PDE6BP35913 SLC25A24-204ENST00000569674 2357 ntBASIC22.68■■□□□ 1.22
PDE6BP35913 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDE6BP35913 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE6BP35913 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
PDE6BP35913 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PDE6BP35913 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE6BP35913 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 UPF3AP3-201ENST00000420996 769 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 MED15P5-201ENST00000423150 992 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 AL591424.1-201ENST00000442569 1213 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE6BP35913 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.67■■□□□ 1.22
PDE6BP35913 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.67■■□□□ 1.22
PDE6BP35913 AC011467.2-201ENST00000598425 242 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 AL356488.2-201ENST00000602755 427 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 AC140113.2-201ENST00000604370 208 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 AL138831.2-201ENST00000606564 490 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE6BP35913 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE6BP35913 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 HLA-J-201ENST00000462773 1622 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.67■■□□□ 1.22
PDE6BP35913 MTMR9LP-203ENST00000426597 1545 ntBASIC22.67■■□□□ 1.22
PDE6BP35913 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDE6BP35913 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.67■■□□□ 1.22
PDE6BP35913 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 RPS2P1-201ENST00000434010 821 ntBASIC22.66■■□□□ 1.22
PDE6BP35913 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.66■■□□□ 1.22
PDE6BP35913 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.66■■□□□ 1.22
PDE6BP35913 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.66■■□□□ 1.22
PDE6BP35913 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.66■■□□□ 1.22
PDE6BP35913 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDE6BP35913 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDE6BP35913 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
PDE6BP35913 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE6BP35913 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.65■■□□□ 1.22
PDE6BP35913 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.65■■□□□ 1.22
PDE6BP35913 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.65■■□□□ 1.22
PDE6BP35913 ABCD1P5-201ENST00000445663 754 ntBASIC22.65■■□□□ 1.22
PDE6BP35913 SART3-203ENST00000546611 1184 ntBASIC22.65■■□□□ 1.22
PDE6BP35913 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.65■■□□□ 1.22
PDE6BP35913 AC034105.1-201ENST00000563488 319 ntBASIC22.65■■□□□ 1.22
PDE6BP35913 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.65■■□□□ 1.22
PDE6BP35913 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDE6BP35913 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PDE6BP35913 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDE6BP35913 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.65■■□□□ 1.22
PDE6BP35913 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.65■■□□□ 1.22
PDE6BP35913 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDE6BP35913 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
PDE6BP35913 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDE6BP35913 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDE6BP35913 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDE6BP35913 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDE6BP35913 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.64■■□□□ 1.21
PDE6BP35913 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.64■■□□□ 1.21
PDE6BP35913 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.64■■□□□ 1.21
PDE6BP35913 AC009154.2-201ENST00000621177 724 ntBASIC22.64■■□□□ 1.21
PDE6BP35913 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDE6BP35913 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.64■■□□□ 1.21
PDE6BP35913 AC009102.3-201ENST00000623118 1491 ntBASIC22.64■■□□□ 1.21
PDE6BP35913 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDE6BP35913 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDE6BP35913 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PDE6BP35913 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PDE6BP35913 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PDE6BP35913 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PDE6BP35913 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 AC125437.2-201ENST00000625180 2167 ntBASIC22.63■■□□□ 1.21
PDE6BP35913 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms