Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 MIR1238-201ENST00000408483 83 ntBASIC17.52■□□□□ 0.4
PTPN6P29350 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN6P29350 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN6P29350 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN6P29350 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 AP000692.2-201ENST00000608391 879 ntBASIC17.52■□□□□ 0.4
PTPN6P29350 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.52■□□□□ 0.4
PTPN6P29350 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PTPN6P29350 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN6P29350 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.52■□□□□ 0.39
PTPN6P29350 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN6P29350 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN6P29350 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
PTPN6P29350 FAM207BP-201ENST00000447172 505 ntBASIC17.51■□□□□ 0.39
PTPN6P29350 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN6P29350 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN6P29350 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN6P29350 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.51■□□□□ 0.39
PTPN6P29350 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN6P29350 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN6P29350 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN6P29350 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN6P29350 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN6P29350 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTPN6P29350 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 AC138028.4-201ENST00000564984 1845 ntBASIC17.5■□□□□ 0.39
PTPN6P29350 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN6P29350 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTPN6P29350 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.5■□□□□ 0.39
PTPN6P29350 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN6P29350 AP005242.2-201ENST00000580065 1175 ntBASIC17.5■□□□□ 0.39
PTPN6P29350 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN6P29350 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN6P29350 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN6P29350 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN6P29350 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN6P29350 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN6P29350 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN6P29350 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN6P29350 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTPN6P29350 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN6P29350 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PTPN6P29350 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTPN6P29350 KRT8P9-201ENST00000558927 1449 ntBASIC17.49■□□□□ 0.39
PTPN6P29350 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN6P29350 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 AC211429.1-201ENST00000415277 523 ntBASIC17.49■□□□□ 0.39
PTPN6P29350 SLC25A6P5-201ENST00000435663 894 ntBASIC17.49■□□□□ 0.39
PTPN6P29350 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN6P29350 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms