Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
GDF1P27539 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GDF1P27539 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GDF1P27539 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
GDF1P27539 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.72■□□□□ 0.27
GDF1P27539 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 HTR7P1-202ENST00000624664 4411 ntBASIC16.72■□□□□ 0.27
GDF1P27539 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GDF1P27539 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.72■□□□□ 0.27
GDF1P27539 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.72■□□□□ 0.27
GDF1P27539 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.72■□□□□ 0.27
GDF1P27539 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.72■□□□□ 0.27
GDF1P27539 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.72■□□□□ 0.27
GDF1P27539 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
GDF1P27539 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.72■□□□□ 0.27
GDF1P27539 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 AL162741.1-201ENST00000565563 1558 ntBASIC16.72■□□□□ 0.27
GDF1P27539 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GDF1P27539 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 AC112777.1-201ENST00000540175 1423 ntBASIC16.71■□□□□ 0.27
GDF1P27539 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 AL163051.1-201ENST00000569214 1512 ntBASIC16.71■□□□□ 0.27
GDF1P27539 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.71■□□□□ 0.27
GDF1P27539 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.71■□□□□ 0.27
GDF1P27539 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.71■□□□□ 0.27
GDF1P27539 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.71■□□□□ 0.27
GDF1P27539 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
GDF1P27539 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.71■□□□□ 0.27
GDF1P27539 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GDF1P27539 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GDF1P27539 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
GDF1P27539 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
GDF1P27539 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
GDF1P27539 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GDF1P27539 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.7■□□□□ 0.26
GDF1P27539 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.7■□□□□ 0.26
GDF1P27539 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GDF1P27539 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.7■□□□□ 0.26
GDF1P27539 AC011498.5-201ENST00000592027 486 ntBASIC16.7■□□□□ 0.26
GDF1P27539 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GDF1P27539 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
GDF1P27539 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.7■□□□□ 0.26
GDF1P27539 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms