Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 AC020763.4-201ENST00000623414 4170 ntBASIC17.52■□□□□ 0.4
MMP11P24347 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
MMP11P24347 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP11P24347 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP11P24347 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP11P24347 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP11P24347 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP11P24347 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP11P24347 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
MMP11P24347 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP11P24347 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP11P24347 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP11P24347 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP11P24347 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
MMP11P24347 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MMP11P24347 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP11P24347 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.39
MMP11P24347 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP11P24347 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP11P24347 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.51■□□□□ 0.39
MMP11P24347 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP11P24347 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 AC090164.3-201ENST00000610780 2143 ntBASIC17.51■□□□□ 0.39
MMP11P24347 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MMP11P24347 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP11P24347 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
MMP11P24347 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP11P24347 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP11P24347 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP11P24347 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
MMP11P24347 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
MMP11P24347 AC112497.1-201ENST00000624824 639 ntBASIC17.51■□□□□ 0.39
MMP11P24347 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP11P24347 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP11P24347 RCC2P3-201ENST00000418112 1537 ntBASIC17.51■□□□□ 0.39
MMP11P24347 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP11P24347 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
MMP11P24347 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP11P24347 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 AC005082.1-201ENST00000413042 2259 ntBASIC17.5■□□□□ 0.39
MMP11P24347 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 HBZP1-201ENST00000354915 429 ntBASIC17.5■□□□□ 0.39
MMP11P24347 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP11P24347 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP11P24347 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP11P24347 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP11P24347 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP11P24347 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.5■□□□□ 0.39
MMP11P24347 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP11P24347 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MMP11P24347 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP11P24347 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms