Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 AP000593.1-201ENST00000393668 712 ntBASIC18.62■□□□□ 0.57
XPAP23025 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.62■□□□□ 0.57
XPAP23025 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.62■□□□□ 0.57
XPAP23025 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.62■□□□□ 0.57
XPAP23025 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 AL121956.5-201ENST00000625261 221 ntBASIC18.62■□□□□ 0.57
XPAP23025 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
XPAP23025 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
XPAP23025 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
XPAP23025 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
XPAP23025 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.62■□□□□ 0.57
XPAP23025 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
XPAP23025 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.62■□□□□ 0.57
XPAP23025 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
XPAP23025 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.61■□□□□ 0.57
XPAP23025 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.61■□□□□ 0.57
XPAP23025 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.61■□□□□ 0.57
XPAP23025 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.61■□□□□ 0.57
XPAP23025 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.61■□□□□ 0.57
XPAP23025 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.61■□□□□ 0.57
XPAP23025 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.61■□□□□ 0.57
XPAP23025 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
XPAP23025 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
XPAP23025 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
XPAP23025 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
XPAP23025 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.6■□□□□ 0.57
XPAP23025 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 VENTXP5-201ENST00000523979 775 ntBASIC18.6■□□□□ 0.57
XPAP23025 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.6■□□□□ 0.57
XPAP23025 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 ZNF444P1-201ENST00000559497 298 ntBASIC18.6■□□□□ 0.57
XPAP23025 AC091076.1-201ENST00000610741 619 ntBASIC18.6■□□□□ 0.57
XPAP23025 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
XPAP23025 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.6■□□□□ 0.57
XPAP23025 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.6■□□□□ 0.57
XPAP23025 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
XPAP23025 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.6■□□□□ 0.57
XPAP23025 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
XPAP23025 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
XPAP23025 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
XPAP23025 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
XPAP23025 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.59■□□□□ 0.57
XPAP23025 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.59■□□□□ 0.57
XPAP23025 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
XPAP23025 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.59■□□□□ 0.57
XPAP23025 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.59■□□□□ 0.57
XPAP23025 MIR3180-4-201ENST00000582223 153 ntBASIC18.59■□□□□ 0.57
XPAP23025 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
XPAP23025 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms