Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A2P16615 AL590627.1-203ENST00000421194 1026 ntBASIC20.36■□□□□ 0.85
ATP2A2P16615 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 AC090616.6-201ENST00000582640 721 ntBASIC20.36■□□□□ 0.85
ATP2A2P16615 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A2P16615 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATP2A2P16615 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A2P16615 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP2A2P16615 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATP2A2P16615 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP2A2P16615 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
ATP2A2P16615 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP2A2P16615 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A2P16615 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A2P16615 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A2P16615 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
ATP2A2P16615 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A2P16615 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A2P16615 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A2P16615 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.34■□□□□ 0.85
ATP2A2P16615 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A2P16615 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ATP2A2P16615 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A2P16615 LINC00167-201ENST00000530583 1419 ntBASIC20.34■□□□□ 0.85
ATP2A2P16615 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 LETM1P2-201ENST00000597330 2178 ntBASIC20.34■□□□□ 0.85
ATP2A2P16615 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A2P16615 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ATP2A2P16615 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 KRT18P13-201ENST00000400056 1290 ntBASIC20.33■□□□□ 0.85
ATP2A2P16615 PMS2P1-201ENST00000431037 1228 ntBASIC20.33■□□□□ 0.85
ATP2A2P16615 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2A2P16615 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.33■□□□□ 0.85
ATP2A2P16615 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.33■□□□□ 0.85
ATP2A2P16615 AC099336.1-202ENST00000602961 463 ntBASIC20.33■□□□□ 0.85
ATP2A2P16615 IGHV3-41-201ENST00000613121 348 ntBASIC20.33■□□□□ 0.85
ATP2A2P16615 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.33■□□□□ 0.85
ATP2A2P16615 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A2P16615 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A2P16615 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A2P16615 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP2A2P16615 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A2P16615 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A2P16615 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP2A2P16615 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A2P16615 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A2P16615 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A2P16615 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A2P16615 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A2P16615 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A2P16615 TSPY12P-201ENST00000421279 868 ntBASIC20.32■□□□□ 0.84
ATP2A2P16615 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms