Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KRT8P3-201ENST00000519669 1449 ntBASIC17.46■□□□□ 0.39
NCK1P16333 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
NCK1P16333 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.46■□□□□ 0.38
NCK1P16333 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.46■□□□□ 0.38
NCK1P16333 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NCK1P16333 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NCK1P16333 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.45■□□□□ 0.38
NCK1P16333 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.45■□□□□ 0.38
NCK1P16333 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.45■□□□□ 0.38
NCK1P16333 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.45■□□□□ 0.38
NCK1P16333 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.45■□□□□ 0.38
NCK1P16333 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 MYLKP1-201ENST00000509077 1580 ntBASIC17.45■□□□□ 0.38
NCK1P16333 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCK1P16333 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.44■□□□□ 0.38
NCK1P16333 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NCK1P16333 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.44■□□□□ 0.38
NCK1P16333 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.44■□□□□ 0.38
NCK1P16333 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.44■□□□□ 0.38
NCK1P16333 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCK1P16333 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCK1P16333 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCK1P16333 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 RCC2P3-201ENST00000418112 1537 ntBASIC17.43■□□□□ 0.38
NCK1P16333 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.43■□□□□ 0.38
NCK1P16333 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.43■□□□□ 0.38
NCK1P16333 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.43■□□□□ 0.38
NCK1P16333 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.43■□□□□ 0.38
NCK1P16333 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.43■□□□□ 0.38
NCK1P16333 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms