Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PEPDP12955 AL512604.3-201ENST00000569583 964 ntBASIC17.09■□□□□ 0.33
PEPDP12955 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.09■□□□□ 0.33
PEPDP12955 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEPDP12955 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEPDP12955 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEPDP12955 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PEPDP12955 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.09■□□□□ 0.33
PEPDP12955 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PEPDP12955 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.09■□□□□ 0.33
PEPDP12955 AL390961.4-201ENST00000623958 2535 ntBASIC17.09■□□□□ 0.33
PEPDP12955 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEPDP12955 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEPDP12955 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PEPDP12955 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.33
PEPDP12955 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEPDP12955 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.08■□□□□ 0.33
PEPDP12955 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PEPDP12955 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
PEPDP12955 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.08■□□□□ 0.33
PEPDP12955 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEPDP12955 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.08■□□□□ 0.32
PEPDP12955 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PEPDP12955 INGX-201ENST00000359239 846 ntBASIC17.08■□□□□ 0.32
PEPDP12955 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PEPDP12955 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 AC005521.1-201ENST00000393351 872 ntBASIC17.08■□□□□ 0.32
PEPDP12955 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 KRT18P21-201ENST00000515767 1272 ntBASIC17.08■□□□□ 0.32
PEPDP12955 FAM87A-204ENST00000613235 858 ntBASIC17.08■□□□□ 0.32
PEPDP12955 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEPDP12955 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.08■□□□□ 0.32
PEPDP12955 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEPDP12955 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PEPDP12955 BICD1-207ENST00000551848 1962 ntBASIC17.08■□□□□ 0.32
PEPDP12955 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PEPDP12955 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.07■□□□□ 0.32
PEPDP12955 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.07■□□□□ 0.32
PEPDP12955 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.07■□□□□ 0.32
PEPDP12955 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.07■□□□□ 0.32
PEPDP12955 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PEPDP12955 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.07■□□□□ 0.32
PEPDP12955 AC092865.7-201ENST00000641832 219 ntBASIC17.07■□□□□ 0.32
PEPDP12955 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.07■□□□□ 0.32
PEPDP12955 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEPDP12955 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PEPDP12955 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
PEPDP12955 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.06■□□□□ 0.32
PEPDP12955 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PEPDP12955 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PEPDP12955 TERF1P1-201ENST00000311003 1181 ntBASIC17.06■□□□□ 0.32
PEPDP12955 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.06■□□□□ 0.32
PEPDP12955 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PEPDP12955 RCN1P1-201ENST00000400413 996 ntBASIC17.06■□□□□ 0.32
PEPDP12955 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 AP003041.3-201ENST00000527151 707 ntBASIC17.06■□□□□ 0.32
PEPDP12955 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
PEPDP12955 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
PEPDP12955 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PEPDP12955 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PEPDP12955 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.06■□□□□ 0.32
PEPDP12955 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms