Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 MCCD1P1-208ENST00000445732 328 ntBASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 SNORA78-201ENST00000459373 127 ntBASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV3-43DP0DP04 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 AL390955.1-201ENST00000428694 934 ntBASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV3-43DP0DP04 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 KRT8P45-201ENST00000414328 1447 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AC112777.1-201ENST00000540175 1423 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AL354751.1-201ENST00000412768 1863 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 UNC93B2-201ENST00000285383 730 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RBM17P1-201ENST00000453646 1190 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AP000525.1-201ENST00000608286 694 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 MYC-208ENST00000641036 567 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 AL109659.2-201ENST00000606809 1674 ntBASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV3-43DP0DP04 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms