Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SLC25A1P2-201ENST00000430693 912 ntBASIC18.52■□□□□ 0.56
APOA4P06727 TSPY15P-201ENST00000457163 923 ntBASIC18.52■□□□□ 0.56
APOA4P06727 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
APOA4P06727 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
APOA4P06727 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOA4P06727 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
APOA4P06727 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APOA4P06727 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.52■□□□□ 0.55
APOA4P06727 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.52■□□□□ 0.55
APOA4P06727 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOA4P06727 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOA4P06727 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 AC005332.8-201ENST00000622750 2735 ntBASIC18.51■□□□□ 0.55
APOA4P06727 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.51■□□□□ 0.55
APOA4P06727 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
APOA4P06727 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.51■□□□□ 0.55
APOA4P06727 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.51■□□□□ 0.55
APOA4P06727 CCR12P-201ENST00000446203 998 ntBASIC18.51■□□□□ 0.55
APOA4P06727 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.51■□□□□ 0.55
APOA4P06727 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APOA4P06727 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOA4P06727 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.5■□□□□ 0.55
APOA4P06727 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.5■□□□□ 0.55
APOA4P06727 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 TSPY17P-201ENST00000450329 467 ntBASIC18.5■□□□□ 0.55
APOA4P06727 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.5■□□□□ 0.55
APOA4P06727 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
APOA4P06727 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
APOA4P06727 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.5■□□□□ 0.55
APOA4P06727 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.5■□□□□ 0.55
APOA4P06727 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APOA4P06727 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
APOA4P06727 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 KRT8P45-201ENST00000414328 1447 ntBASIC18.49■□□□□ 0.55
APOA4P06727 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 PCDHB18P-201ENST00000524813 2368 ntBASIC18.49■□□□□ 0.55
APOA4P06727 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
APOA4P06727 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.49■□□□□ 0.55
APOA4P06727 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 NAPSB-206ENST00000562112 1266 ntBASIC18.49■□□□□ 0.55
APOA4P06727 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.49■□□□□ 0.55
APOA4P06727 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.49■□□□□ 0.55
APOA4P06727 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
APOA4P06727 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APOA4P06727 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOA4P06727 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms