Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.33■□□□□ 0.2
APOC1P02654 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.33■□□□□ 0.2
APOC1P02654 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.33■□□□□ 0.2
APOC1P02654 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.33■□□□□ 0.2
APOC1P02654 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
APOC1P02654 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.33■□□□□ 0.2
APOC1P02654 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.33■□□□□ 0.2
APOC1P02654 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APOC1P02654 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.33■□□□□ 0.2
APOC1P02654 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
APOC1P02654 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
APOC1P02654 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APOC1P02654 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
APOC1P02654 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.32■□□□□ 0.2
APOC1P02654 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
APOC1P02654 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
APOC1P02654 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 RCC2P3-201ENST00000418112 1537 ntBASIC16.32■□□□□ 0.2
APOC1P02654 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
APOC1P02654 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.32■□□□□ 0.2
APOC1P02654 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 AC116562.2-201ENST00000507042 360 ntBASIC16.32■□□□□ 0.2
APOC1P02654 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.32■□□□□ 0.2
APOC1P02654 NUDT16P1-203ENST00000513809 620 ntBASIC16.32■□□□□ 0.2
APOC1P02654 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.32■□□□□ 0.2
APOC1P02654 AC096733.2-201ENST00000609937 1394 ntBASIC16.32■□□□□ 0.2
APOC1P02654 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.32■□□□□ 0.2
APOC1P02654 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APOC1P02654 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
APOC1P02654 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
APOC1P02654 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.31■□□□□ 0.2
APOC1P02654 AL109659.2-201ENST00000606809 1674 ntBASIC16.31■□□□□ 0.2
APOC1P02654 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 AL162741.1-201ENST00000565563 1558 ntBASIC16.31■□□□□ 0.2
APOC1P02654 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.31■□□□□ 0.2
APOC1P02654 KRT8P45-201ENST00000414328 1447 ntBASIC16.31■□□□□ 0.2
APOC1P02654 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 AC008040.2-201ENST00000461049 708 ntBASIC16.31■□□□□ 0.2
APOC1P02654 CA15P1-201ENST00000481698 905 ntBASIC16.31■□□□□ 0.2
APOC1P02654 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.31■□□□□ 0.2
APOC1P02654 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.31■□□□□ 0.2
APOC1P02654 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC1P02654 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APOC1P02654 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APOC1P02654 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
APOC1P02654 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
APOC1P02654 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC1P02654 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms