Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 TERF1P2-201ENST00000583350 1212 ntBASIC14.62□□□□□ -0.07
IFNA1P01562 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.61□□□□□ -0.07
IFNA1P01562 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
IFNA1P01562 EDA-201ENST00000338901 1233 ntBASIC14.61□□□□□ -0.07
IFNA1P01562 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
IFNA1P01562 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.61□□□□□ -0.07
IFNA1P01562 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IFNA1P01562 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.61□□□□□ -0.07
IFNA1P01562 AL121761.2-201ENST00000598007 1648 ntBASIC14.61□□□□□ -0.07
IFNA1P01562 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
IFNA1P01562 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.61□□□□□ -0.07
IFNA1P01562 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IFNA1P01562 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
IFNA1P01562 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
IFNA1P01562 REXO1L9P-201ENST00000604264 2108 ntBASIC14.6□□□□□ -0.07
IFNA1P01562 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.6□□□□□ -0.07
IFNA1P01562 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.6□□□□□ -0.07
IFNA1P01562 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
IFNA1P01562 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
IFNA1P01562 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
IFNA1P01562 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 TERF1P5-201ENST00000477545 1207 ntBASIC14.6□□□□□ -0.07
IFNA1P01562 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.6□□□□□ -0.07
IFNA1P01562 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 HEIH-201ENST00000623091 1652 ntBASIC14.6□□□□□ -0.07
IFNA1P01562 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.6□□□□□ -0.07
IFNA1P01562 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IFNA1P01562 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.6□□□□□ -0.07
IFNA1P01562 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
IFNA1P01562 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IFNA1P01562 LINC02228-203ENST00000641970 1355 ntBASIC14.6□□□□□ -0.07
IFNA1P01562 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms