Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CPNE6O95741 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CPNE6O95741 AL133373.2-201ENST00000623187 2828 ntBASIC18.11■□□□□ 0.49
CPNE6O95741 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CPNE6O95741 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE6O95741 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE6O95741 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE6O95741 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE6O95741 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.1■□□□□ 0.49
CPNE6O95741 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.1■□□□□ 0.49
CPNE6O95741 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE6O95741 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE6O95741 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE6O95741 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CPNE6O95741 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPNE6O95741 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
CPNE6O95741 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 SPDYE13P-201ENST00000445314 798 ntBASIC18.09■□□□□ 0.49
CPNE6O95741 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE6O95741 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE6O95741 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.09■□□□□ 0.49
CPNE6O95741 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 AC018470.1-201ENST00000624790 3129 ntBASIC18.09■□□□□ 0.49
CPNE6O95741 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE6O95741 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE6O95741 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CPNE6O95741 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE6O95741 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE6O95741 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE6O95741 NOC2LP2-201ENST00000407594 1944 ntBASIC18.08■□□□□ 0.49
CPNE6O95741 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
CPNE6O95741 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE6O95741 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE6O95741 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.08■□□□□ 0.48
CPNE6O95741 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE6O95741 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE6O95741 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CPNE6O95741 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE6O95741 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 AC138932.1-201ENST00000534164 6830 ntBASIC18.07■□□□□ 0.48
CPNE6O95741 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE6O95741 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CPNE6O95741 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE6O95741 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE6O95741 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE6O95741 AC092597.1-201ENST00000487352 616 ntBASIC18.07■□□□□ 0.48
CPNE6O95741 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.07■□□□□ 0.48
CPNE6O95741 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPNE6O95741 AC112497.1-201ENST00000624824 639 ntBASIC18.07■□□□□ 0.48
CPNE6O95741 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CPNE6O95741 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE6O95741 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE6O95741 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CPNE6O95741 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms