Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN3O95197 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RTN3O95197 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN3O95197 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN3O95197 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN3O95197 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN3O95197 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 AL645929.1-201ENST00000420084 975 ntBASIC19.43■□□□□ 0.7
RTN3O95197 PVRIG2P-201ENST00000435460 978 ntBASIC19.43■□□□□ 0.7
RTN3O95197 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN3O95197 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN3O95197 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
RTN3O95197 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN3O95197 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN3O95197 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN3O95197 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RTN3O95197 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RTN3O95197 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN3O95197 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RTN3O95197 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN3O95197 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RTN3O95197 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN3O95197 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN3O95197 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN3O95197 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN3O95197 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN3O95197 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN3O95197 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN3O95197 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN3O95197 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN3O95197 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RTN3O95197 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN3O95197 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN3O95197 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN3O95197 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN3O95197 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN3O95197 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN3O95197 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN3O95197 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTN3O95197 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms