Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST1O76090 AL024508.2-201ENST00000607749 1894 ntBASIC19.34■□□□□ 0.69
BEST1O76090 AL138781.2-201ENST00000617896 1843 ntBASIC19.34■□□□□ 0.69
BEST1O76090 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST1O76090 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BEST1O76090 LINC01126-201ENST00000623515 1646 ntBASIC19.33■□□□□ 0.69
BEST1O76090 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
BEST1O76090 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.33■□□□□ 0.68
BEST1O76090 UPK3BP1-201ENST00000428678 509 ntBASIC19.33■□□□□ 0.68
BEST1O76090 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.33■□□□□ 0.68
BEST1O76090 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.33■□□□□ 0.68
BEST1O76090 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BEST1O76090 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
BEST1O76090 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.32■□□□□ 0.68
BEST1O76090 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
BEST1O76090 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BEST1O76090 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
BEST1O76090 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.32■□□□□ 0.68
BEST1O76090 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 AC011498.5-201ENST00000592027 486 ntBASIC19.32■□□□□ 0.68
BEST1O76090 AC024563.2-201ENST00000603282 481 ntBASIC19.32■□□□□ 0.68
BEST1O76090 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.32■□□□□ 0.68
BEST1O76090 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BEST1O76090 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
BEST1O76090 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
BEST1O76090 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BEST1O76090 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.31■□□□□ 0.68
BEST1O76090 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BEST1O76090 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 AC104581.1-202ENST00000635932 2618 ntBASIC19.31■□□□□ 0.68
BEST1O76090 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.31■□□□□ 0.68
BEST1O76090 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.31■□□□□ 0.68
BEST1O76090 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
BEST1O76090 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.31■□□□□ 0.68
BEST1O76090 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BEST1O76090 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.31■□□□□ 0.68
BEST1O76090 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BEST1O76090 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BEST1O76090 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
BEST1O76090 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.3■□□□□ 0.68
BEST1O76090 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST1O76090 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
BEST1O76090 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BEST1O76090 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.3■□□□□ 0.68
BEST1O76090 AP003733.1-201ENST00000491725 852 ntBASIC19.3■□□□□ 0.68
BEST1O76090 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST1O76090 AC005332.3-201ENST00000589904 676 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms