Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
LRCH4O75427 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 GMCL1P1-201ENST00000463439 1581 ntBASIC19.2■□□□□ 0.66
LRCH4O75427 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.2■□□□□ 0.66
LRCH4O75427 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.2■□□□□ 0.66
LRCH4O75427 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.2■□□□□ 0.66
LRCH4O75427 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.2■□□□□ 0.66
LRCH4O75427 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 AC145285.6-201ENST00000604632 637 ntBASIC19.2■□□□□ 0.66
LRCH4O75427 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH4O75427 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH4O75427 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH4O75427 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH4O75427 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH4O75427 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH4O75427 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH4O75427 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH4O75427 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH4O75427 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRCH4O75427 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH4O75427 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.19■□□□□ 0.66
LRCH4O75427 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH4O75427 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH4O75427 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRCH4O75427 KRT18P22-201ENST00000402024 1347 ntBASIC19.19■□□□□ 0.66
LRCH4O75427 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH4O75427 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
LRCH4O75427 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH4O75427 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 SEC1P-202ENST00000473944 940 ntBASIC19.18■□□□□ 0.66
LRCH4O75427 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 AL512604.3-201ENST00000569583 964 ntBASIC19.18■□□□□ 0.66
LRCH4O75427 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.18■□□□□ 0.66
LRCH4O75427 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRCH4O75427 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.18■□□□□ 0.66
LRCH4O75427 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LRCH4O75427 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH4O75427 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms