Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC25.47■■□□□ 1.67
BRD4O60885 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC25.47■■□□□ 1.67
BRD4O60885 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
BRD4O60885 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD4O60885 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
BRD4O60885 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BRD4O60885 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD4O60885 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 AC034236.2-201ENST00000606662 1610 ntBASIC25.46■■□□□ 1.67
BRD4O60885 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 TOB2P1-201ENST00000469761 992 ntBASIC25.46■■□□□ 1.67
BRD4O60885 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.46■■□□□ 1.67
BRD4O60885 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.46■■□□□ 1.67
BRD4O60885 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.46■■□□□ 1.67
BRD4O60885 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 SNAI3-AS1-205ENST00000568633 2096 ntBASIC25.46■■□□□ 1.67
BRD4O60885 COBL-210ENST00000632460 1941 ntTSL 5 BASIC25.46■■□□□ 1.67
BRD4O60885 Z83836.1-201ENST00000624605 1642 ntBASIC25.46■■□□□ 1.67
BRD4O60885 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD4O60885 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
BRD4O60885 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 LINC00265-3P-201ENST00000447588 903 ntBASIC25.45■■□□□ 1.67
BRD4O60885 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.45■■□□□ 1.67
BRD4O60885 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.45■■□□□ 1.67
BRD4O60885 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD4O60885 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
BRD4O60885 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
BRD4O60885 KRT89P-201ENST00000620027 1478 ntBASIC25.45■■□□□ 1.66
BRD4O60885 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC25.45■■□□□ 1.66
BRD4O60885 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
BRD4O60885 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BRD4O60885 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
BRD4O60885 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.45■■□□□ 1.66
BRD4O60885 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC25.44■■□□□ 1.66
BRD4O60885 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
BRD4O60885 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.44■■□□□ 1.66
BRD4O60885 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.44■■□□□ 1.66
BRD4O60885 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC25.44■■□□□ 1.66
BRD4O60885 GPR32P1-201ENST00000601788 811 ntBASIC25.44■■□□□ 1.66
BRD4O60885 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC25.44■■□□□ 1.66
BRD4O60885 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.44■■□□□ 1.66
BRD4O60885 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC25.44■■□□□ 1.66
BRD4O60885 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.44■■□□□ 1.66
BRD4O60885 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 NFYC-AS1-201ENST00000606277 1687 ntBASIC25.44■■□□□ 1.66
BRD4O60885 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.44■■□□□ 1.66
BRD4O60885 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD4O60885 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
BRD4O60885 AP003733.1-201ENST00000491725 852 ntBASIC25.44■■□□□ 1.66
BRD4O60885 AC106795.1-205ENST00000512851 1056 ntBASIC25.44■■□□□ 1.66
BRD4O60885 AL732292.2-201ENST00000609649 430 ntBASIC25.44■■□□□ 1.66
BRD4O60885 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD4O60885 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD4O60885 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD4O60885 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
BRD4O60885 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.43■■□□□ 1.66
BRD4O60885 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD4O60885 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC25.43■■□□□ 1.66
BRD4O60885 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
BRD4O60885 KRT18P31-201ENST00000506277 1292 ntBASIC25.43■■□□□ 1.66
BRD4O60885 AC005332.3-201ENST00000589904 676 ntBASIC25.43■■□□□ 1.66
BRD4O60885 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.43■■□□□ 1.66
BRD4O60885 AL031008.1-201ENST00000619963 541 ntBASIC25.43■■□□□ 1.66
BRD4O60885 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.43■■□□□ 1.66
BRD4O60885 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC25.43■■□□□ 1.66
BRD4O60885 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms