Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.27■□□□□ 0.51
NOBOXO60393 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.27■□□□□ 0.51
NOBOXO60393 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.26■□□□□ 0.51
NOBOXO60393 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.26■□□□□ 0.51
NOBOXO60393 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NOBOXO60393 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
NOBOXO60393 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.26■□□□□ 0.51
NOBOXO60393 SEC1P-202ENST00000473944 940 ntBASIC18.26■□□□□ 0.51
NOBOXO60393 AC092597.1-201ENST00000487352 616 ntBASIC18.26■□□□□ 0.51
NOBOXO60393 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.26■□□□□ 0.51
NOBOXO60393 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.26■□□□□ 0.51
NOBOXO60393 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 AC093458.2-201ENST00000623150 629 ntBASIC18.26■□□□□ 0.51
NOBOXO60393 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.26■□□□□ 0.51
NOBOXO60393 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOBOXO60393 AL512353.2-201ENST00000448759 1962 ntBASIC18.26■□□□□ 0.51
NOBOXO60393 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
NOBOXO60393 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NOBOXO60393 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.25■□□□□ 0.51
NOBOXO60393 CROCCP3-202ENST00000420820 1947 ntBASIC18.25■□□□□ 0.51
NOBOXO60393 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NOBOXO60393 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.25■□□□□ 0.51
NOBOXO60393 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NOBOXO60393 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.25■□□□□ 0.51
NOBOXO60393 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.25■□□□□ 0.51
NOBOXO60393 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.25■□□□□ 0.51
NOBOXO60393 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
NOBOXO60393 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOBOXO60393 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.24■□□□□ 0.51
NOBOXO60393 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 RCC2P3-201ENST00000418112 1537 ntBASIC18.24■□□□□ 0.51
NOBOXO60393 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
NOBOXO60393 FEM1AP3-201ENST00000403722 1741 ntBASIC18.24■□□□□ 0.51
NOBOXO60393 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.24■□□□□ 0.51
NOBOXO60393 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.24■□□□□ 0.51
NOBOXO60393 AC069148.1-201ENST00000608741 768 ntBASIC18.24■□□□□ 0.51
NOBOXO60393 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
NOBOXO60393 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NOBOXO60393 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.24■□□□□ 0.51
NOBOXO60393 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.24■□□□□ 0.51
NOBOXO60393 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
NOBOXO60393 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NOBOXO60393 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOBOXO60393 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOBOXO60393 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOBOXO60393 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.23■□□□□ 0.51
NOBOXO60393 IRX1P1-201ENST00000438849 1838 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms