Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
URB1O60287 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
URB1O60287 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.4■□□□□ 0.38
URB1O60287 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.4■□□□□ 0.38
URB1O60287 AC024563.2-201ENST00000603282 481 ntBASIC17.4■□□□□ 0.38
URB1O60287 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.4■□□□□ 0.38
URB1O60287 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 AC104109.2-201ENST00000602919 1418 ntBASIC17.4■□□□□ 0.38
URB1O60287 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
URB1O60287 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
URB1O60287 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.39■□□□□ 0.38
URB1O60287 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
URB1O60287 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
URB1O60287 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
URB1O60287 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 AC211486.1-202ENST00000416371 468 ntBASIC17.39■□□□□ 0.37
URB1O60287 AC211476.1-201ENST00000503899 468 ntBASIC17.39■□□□□ 0.37
URB1O60287 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
URB1O60287 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
URB1O60287 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.39■□□□□ 0.37
URB1O60287 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
URB1O60287 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.39■□□□□ 0.37
URB1O60287 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
URB1O60287 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
URB1O60287 AC004832.2-201ENST00000426397 482 ntBASIC17.38■□□□□ 0.37
URB1O60287 KRT18P3-201ENST00000451602 1288 ntBASIC17.38■□□□□ 0.37
URB1O60287 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.38■□□□□ 0.37
URB1O60287 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 AL355877.3-201ENST00000622820 899 ntBASIC17.38■□□□□ 0.37
URB1O60287 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 ZNF815P-204ENST00000434898 1737 ntBASIC17.38■□□□□ 0.37
URB1O60287 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.38■□□□□ 0.37
URB1O60287 MED15P5-201ENST00000423150 992 ntBASIC17.38■□□□□ 0.37
URB1O60287 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.38■□□□□ 0.37
URB1O60287 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.38■□□□□ 0.37
URB1O60287 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
URB1O60287 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.38■□□□□ 0.37
URB1O60287 TREX1-205ENST00000625293 1783 ntBASIC17.37■□□□□ 0.37
URB1O60287 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.37■□□□□ 0.37
URB1O60287 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 AL591424.1-201ENST00000442569 1213 ntBASIC17.37■□□□□ 0.37
URB1O60287 DNAJB3-201ENST00000446806 729 ntBASIC17.37■□□□□ 0.37
URB1O60287 AC132008.2-207ENST00000454517 770 ntBASIC17.37■□□□□ 0.37
URB1O60287 FAM197Y3-203ENST00000618346 717 ntBASIC17.37■□□□□ 0.37
URB1O60287 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.37■□□□□ 0.37
URB1O60287 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
URB1O60287 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 AL162377.1-201ENST00000618844 1793 ntBASIC17.37■□□□□ 0.37
URB1O60287 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
URB1O60287 KRT8P3-201ENST00000519669 1449 ntBASIC17.37■□□□□ 0.37
URB1O60287 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.37■□□□□ 0.37
URB1O60287 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
URB1O60287 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms